25-Hydroxycholesterol activates the integrated stress response to reprogram transcription and translation in macrophages.
Journal of Biological Chemistry. 2013 Dec 13; 288 (50): 35812–35823 PubMed
Shibata N, Carlin AF, Spann NJ, Saijo K, Morello CS, McDonald JG, Romanoski CE, Maurya MR, Kaikkonen MU, Lam MT, Crotti A, Reichart D, Fox JN, Quehenberger O, Raetz CR, Sullards MC, Murphy RC, Merrill AH Jr, Brown HA, Dennis EA, Fahy E, Subramaniam S, Cavener DR, Spector DH, Russell DW, Glass CK.
A combined omics study on activated macrophages–enhanced role of STATs in apoptosis, immunity and lipid metabolism.
Bioinformatics. 2013 Nov 1; 29 (21): 2735-2743 PubMed
Dinasarapu AR, Gupta S, Ram Maurya M, Fahy E, Min J, Sud M, Gersten MJ, Glass CK, Subramaniam S.
Analysis of inflammatory and lipid metabolic networks across RAW264.7 and thioglycolate-elicited macrophages.
Journal of Lipid Research. 2013 Sep; 54 (9): 2525-2542 PubMed
Maurya MR, Gupta S, Li X, Fahy E, Dinasarapu AR, Sud M, Brown HA, Glass CK, Murphy RC, Russell DW, Dennis EA, Subramaniam S.
CMAP: Complement Map Database.
Bioinformatics. 2013 Jul 15; 29 (14): 1832-1833 PubMed
Yang K, Dinasarapu AR, Reis ES, Deangelis RA, Ricklin D, Subramaniam S, Lambris JD.
Community Structure Analysis of Gene Interaction Networks in Duchenne Muscular Dystrophy.
PLoS One. 2013 Jun 19; 8 (6): e67237 PubMed
Narayanan T, Subramaniam S.
Developing microRNA screening as a functional genomics tool for disease research.
Frontiers in Physiology. 2013 Aug 27; 4: 223 PubMed
Lemons D, Maurya MR, Subramaniam S, Mercola M.
Inferring the effective TOR-dependent network: a computational study in yeast.
BMC Systems Biology. 2013 Aug 30; 7: 84 PubMed
Mohammadi S, Subramaniam S, Grama A.
Mechanosensitive microRNAs-role in endothelial responses to shear stress and redox state.
Free Radical Biology & Medicine. 2013 Sep; 64: 61-8 PubMed
Marin T, Gongol B, Chen Z, Woo B, Subramaniam S, Chien S, Shyy JY.
Quantitative transcriptomics using designed primer-based amplification.
Science Reports. 2013 Apr 29; 3: 1740 PubMed
Bhargava V, Ko P, Willems E, Mercola M, Subramaniam S.
The poor performance of TMM on microRNA-Seq.
RNA. 2013 Jun; 19 (6): 735-736 PubMed
Garmire LX, Subramaniam S.