A complement-IL-4 regulatory circuit controls liver regeneration.
The Journal of Immunology. 2012 Jan 15; 188 (2): 641-648 PubMed
DeAngelis RA, Markiewski MM, Kourtzelis I, Rafail S, Syriga M, Sandor A, Maurya MR, Gupta S, Subramaniam S, Lambris JD.
B-cell ligand processing pathways detected by large-scale comparative analysis.
Genomics Proteomics Bioinformatics. 2012 Jun 10 (3): 142-152 PubMed
Towfic F, Gupta S, Honavar V, Subramaniam S.
Comparison of statistical and optimisation-based methods for data-driven network reconstruction of biochemical systems.
IET Systems Biology. 2012 Oct; 6(5):155-63 PubMed
Asadi, B, Maurya MR, Tartakovsky DM, Subramaniam S.
Doubly Penalized LASSO Reconstruction of Biological Networks.
IEEExplore. 2012 Dec 3; 13154844 IEEEXplore Digital Library
Asadi B, Tartakovsky DM, Maurya MR, Subramaniam S.
Evaluation of normalization methods in mammalian microRNA-Seq data.
RNA. 2012 Jun; 18 (6): 1279-1288 PubMed
Garmire LX, Subramaniam S.
Evolution of bioengineering at UCSD: opening new vistas.
IEEE Pulse. 2012 Jul; 3 (4):49-55 PubMed
Subramaniam S.
Functional classification of skeletal muscle networks. I. Normal physiology.
Journal of Applied Physiology. 2012 Dec 15; 113 (12): 1884-1901 PubMed
Wang Y, Winters J, Subramaniam S.
Functional classification of skeletal muscle networks. II. Applications to pathophysiology.
Journal of Applied Physiology. 2012 Dec 15; 113 (12): 1902-1920 PubMed
Wang Y, Winters J, Subramaniam S.
Gene-expression measurement: variance-modeling considerations for robust data analysis.
Nature Immunology. 2012 Feb 16; 13 (3): 199-203 PubMed
Subramaniam S, Hsiao G.
Introduction to Network Biology in “Functional Coherence of Molecular Networks to Bioinformatics.”
Springer (2012) SpringerLink
Koyuturk M, Subramaniam S, Grama A.
LIPID MAPS-Nature Lipidomics Gateway: An Online Resource for Students and Educators Interested in Lipids.
Journal of Chemical Education.2012 Jan 10; 89 (2): 291-292 PubMed
Sud M, Fahy E, Cotter D, Dennis EA, Subramaniam S.
PEG-albumin plasma expansion increases expression of MCP-1 evidencing increased circulatory wall shear stress: an experimental study.
PLoS One. 2012 Jun 14; 7 (6): e39111 PubMed
Hightower CM, Salazar Vázquez BY, Acharya SA, Subramaniam S, Intaglietta M.
Regulated accumulation of desmosterol integrates macrophage lipid metabolism and inflammatory responses.
Cell. 2012 Sep 28; 151 (1): 138-52 PubMed
Spann NJ, Garmire LX, McDonald JG, Myers DS, Milne SB, Shibata N, Reichart D, Fox JN, Shaked I, Heudobler D, Raetz CR, Wang EW, Kelly SL, Sullards MC, Murphy RC, Merrill AH Jr, Brown HA, Dennis EA, Li AC, Ley K, Tsimikas S, Fahy E, Subramaniam S, Quehenberger O, Russell DW, Glass CK.
Stochastic operator-splitting method for reaction-diffusion systems.
The Journal of Chemical Physics. 2012 Nov 14; 137 (18): 184102 PubMed
Choi T, Maurya MR, Tartakovsky DM, Subramaniam S.
Template-based combinatorial enumeration of virtual compound libraries for lipids.
Journal of Cheminformatics. 2012 Sep 25; 4 (1): 23 PubMed
Sud M, Fahy E, Subramaniam S.
Transcriptional abnormalities of hamstring muscle contractures in children with cerebral palsy.
PLoS One. 2012 Aug 16; 7 (8): e40686 PubMed
Smith LR, Chambers HG, Subramaniam S, Lieber RL.
Whole-genome microRNA screening identifies let-7 and mir-18 as regulators of germ layer formation during early embryogenesis.
Genes & Development. 2012 Dec 1; 26 (23): 2567–2579 PubMed
Colas AR, McKeithan WL, Cunningham TJ, Bushway PJ, Garmire LX, Duester G, Subramaniam S, Mercola M.