{"id":134,"date":"2017-03-23T09:43:44","date_gmt":"2017-03-23T16:43:44","guid":{"rendered":"https:\/\/genome.ucsd.edu\/?page_id=134"},"modified":"2022-10-24T09:02:05","modified_gmt":"2022-10-24T16:02:05","slug":"2010-2","status":"publish","type":"page","link":"https:\/\/genome.ucsd.edu\/index.php\/publications-2\/2010-2\/","title":{"rendered":"2010"},"content":{"rendered":"<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>A mouse macrophage lipidome.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nThe Journal of Biological Chemistry. 2010 Dec 17; 285 (51): 39976-39985<b><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20923771\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Dennis EA, Deems RA, Harkewicz R, Quehenberger O, Brown HA, Milne SB, Myers DS, Glass CK, Hardiman G, Reichart D, Merrill AH Jr, Sullards MC, Wang E, Murphy RC, Raetz CR, Garrett TA, Guan Z, Ryan AC, Russell DW, McDonald JG, Thompson BM, Shaw WA, Sud M, Zhao Y, Gupta S, Maurya MR, Fahy E, Subramaniam S.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Application of proteomic marker ensembles to subcellular organelle identification.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nMolecular &amp; Cellular Proteomics. 2010 Feb; 9 (2): 388-402<b><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/19884172\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Andreyev AY, Shen Z, Guan Z, Ryan A, Fahy E, Subramaniam S, Raetz CR, Briggs S, Dennis EA.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Classification studies based on a spectral representation of DNA.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nJournal of Theoretical Biology. 2010 Oct 21; 266 (4): 667-674<b><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20691193\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Bieli\u0144ska-Waz D, Subramaniam S.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Conserved regulatory motifs at phenylethanolamine N-methyltransferase (PNMT) are disrupted by common functional genetic variation: an integrated computational\/experimental approach.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nMammalian Genome. 2010 Apr; 21 (3-4): 195-204 <b><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20204374\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Rodr\u00edguez-Flores JL, Zhang K, Kang SW, Wen G, Ghosh S, Friese RS, Mahata SK, Subramaniam S, Hamilton BA, O&#8217;Connor DT.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Identification of crosstalk between phosphoprotein signaling pathways in RAW 264.7 macrophage cells.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nPLoS Computational Biology. 2010 Jan 29; 6 (1): e1000654 <b><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/20126526\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Gupta S, Maurya MR, Subramaniam S.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Lipidomics reveals a remarkable diversity of lipids in human plasma.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nJournal of Lipid Research. 2010 Nov; 51 (11): 3299-3305 <b><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20671299\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Quehenberger O, Armando AM, Brown AH, Milne SB, Myers DS, Merrill AH, Bandyopadhyay S, Jones KN, Kelly S, Shaner RL, Sullards CM, Wang E, Murphy RC, Barkley RM, Leiker TJ, Raetz CR, Guan Z, Laird GM, Six DA, Russell DW, McDonald JG, Subramaniam S, Fahy E, Dennis EA.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Role of microRNA-23b in flow-regulation of Rb phosphorylation and endothelial cell growth.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nProceedings of the National Academy of Sciences of the USA. 2010 Feb 16; 107 (7): 3234-3239<b><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/20133741\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Wang KC, Garmire LX, Young A, Nguyen P, Trinh A, Subramaniam S, Wang N, Shyy JY, Li YS, Chien S.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Stochastic hybrid modeling of intracellular calcium dynamics.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nThe Journal of Chemical Physics. 2010 Oct 28; 133 (16): 165101 <b><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/21033822\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Choi T, Maurya MR, Tartakovsky DM, Subramaniam S.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Subcellular organelle lipidomics in TLR-4-activated macrophages.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nJournal of Lipid Research.2010 Sep; 51 (9): 2785-2797<b><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20574076\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Andreyev AY, Fahy E, Guan Z, Kelly S, Li X, McDonald JG, Milne S, Myers D, Park H, Ryan A, Thompson BM, Wang E, Zhao Y, Brown HA, Merrill AH, Raetz CR, Russell DW, Subramaniam S, Dennis EA<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Systems medicine&#8211;viewed through the real and computing lenses.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nWiley Interdisciplinary Reviews: Systems Biology &amp; Medicine. 2010 Jul-Aug; 2 (4): 383-384 <b><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/20836036\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Subramaniam S, Nadeau JH.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Systems biology and medicine&#8211;metazoan life and processes.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nWiley Interdisciplinary Reviews: Systems Biology &amp; Medicine. 2010 May-Jun; 2 (3): 253-254 <b><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20836027\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Subramaniam S, Nadeau JH.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Systems biology and medicine&#8211;meta-issues and frameworks.<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nWiley Interdisciplinary Reviews: Systems Biology &amp; Medicine. 2010 Mar-Apr; 2 (2): i-ii <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20836016\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Subramaniam S, Nadeau JH.<\/p>\n<p class=\"title\"><span style=\"color: #000000; font-size: large;\"><b>Systems biology&#8211;old wine in a new bottle or is the bottle changing the wine?<\/b><\/span><span style=\"color: #008080; font-size: large;\"><br \/>\nWiley Interdisciplinary Reviews: Systems Biology &amp; Medicine. 2010 Jan-Feb; 2 (1): 1-2 <b><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/20836006\" target=\"_blank\" rel=\"noopener\"><span style=\"color: #ff5733; font-size: small;\"> PubMed<\/span><\/a><\/b><\/span><\/p>\n<p class=\"desc\" style=\"font-size: large;\">Nadeau JH, Subramaniam S.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>A mouse macrophage lipidome. The Journal of Biological Chemistry. 2010 Dec 17; 285 (51): 39976-39985 PubMed Dennis EA, Deems RA, Harkewicz R, [&hellip;]<\/p>\n","protected":false},"author":10,"featured_media":0,"parent":186,"menu_order":9,"comment_status":"closed","ping_status":"closed","template":"page-templates\/page_fullwidth.php","meta":{"footnotes":""},"class_list":["post-134","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/134","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/users\/10"}],"replies":[{"embeddable":true,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/comments?post=134"}],"version-history":[{"count":11,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/134\/revisions"}],"predecessor-version":[{"id":1358,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/134\/revisions\/1358"}],"up":[{"embeddable":true,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/186"}],"wp:attachment":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/media?parent=134"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}