{"id":130,"date":"2017-03-23T09:27:24","date_gmt":"2017-03-23T16:27:24","guid":{"rendered":"https:\/\/genome.ucsd.edu\/?page_id=130"},"modified":"2022-10-24T09:00:42","modified_gmt":"2022-10-24T16:00:42","slug":"2012-2","status":"publish","type":"page","link":"https:\/\/genome.ucsd.edu\/index.php\/publications-2\/2012-2\/","title":{"rendered":"2012"},"content":{"rendered":"

A complement-IL-4 regulatory circuit controls liver regeneration.<\/b><\/span>
\nThe Journal of Immunology. 2012 Jan 15; 188 (2): 641-648\u00a0 PubMed<\/span><\/a><\/span><\/p>\n

DeAngelis RA, Markiewski MM, Kourtzelis I, Rafail S, Syriga M, Sandor A, Maurya MR, Gupta S, Subramaniam S, Lambris JD.<\/p>\n

B-cell ligand processing pathways detected by large-scale comparative analysis.<\/b><\/span>
\nGenomics Proteomics Bioinformatics. 2012 Jun 10 (3): 142-152 PubMed<\/span><\/a><\/span><\/p>\n

Towfic F, Gupta S, Honavar V, Subramaniam S.<\/p>\n

Comparison of statistical and optimisation-based methods for data-driven network reconstruction of biochemical systems.<\/b><\/span>
\nIET Systems Biology. 2012 Oct; 6(5):155-63 PubMed<\/span><\/a><\/span><\/p>\n

Asadi, B, Maurya MR, Tartakovsky DM, Subramaniam S.<\/p>\n

Doubly Penalized LASSO Reconstruction of Biological Networks.<\/b><\/span>
\nIEEExplore. 2012 Dec 3; 13154844 IEEEXplore Digital Library<\/span><\/a><\/span><\/p>\n

Asadi B, Tartakovsky DM, Maurya MR, Subramaniam S.<\/p>\n

Evaluation of normalization methods in mammalian microRNA-Seq data.<\/b><\/span>
\nRNA. 2012 Jun; 18 (6): 1279-1288 PubMed<\/span><\/a><\/span><\/p>\n

Garmire LX, Subramaniam S.<\/p>\n

Evolution of bioengineering at UCSD: opening new vistas.<\/b><\/span>
\nIEEE Pulse. 2012 Jul; 3 (4):49-55\u00a0 PubMed<\/span><\/a><\/span><\/p>\n

Subramaniam S.<\/p>\n

Functional classification of skeletal muscle networks. I. Normal physiology.<\/b><\/span>
\nJournal of Applied Physiology. 2012 Dec 15; 113 (12): 1884-1901 <\/span> PubMed<\/span><\/a><\/p>\n

Wang Y, Winters J, Subramaniam S.<\/p>\n

Functional classification of skeletal muscle networks. II. Applications to pathophysiology.<\/b><\/span>
\nJournal of Applied Physiology. <\/span>2012 Dec 15; 113 (12): 1902-1920 PubMed<\/span><\/a><\/p>\n

Wang Y, Winters J, Subramaniam S.<\/p>\n

Gene-expression measurement: variance-modeling considerations for robust data analysis.<\/b><\/span>
\nNature Immunology. 2012 Feb 16; 13 (3): 199-203 PubMed<\/span><\/a><\/span><\/p>\n

Subramaniam S, Hsiao G.<\/p>\n

Introduction to Network Biology in “Functional Coherence of Molecular Networks to Bioinformatics.”<\/b><\/span>
\nSpringer (2012) SpringerLink<\/span><\/a><\/span><\/p>\n

Koyuturk M, Subramaniam S, Grama A.<\/p>\n

LIPID MAPS-Nature Lipidomics Gateway: An Online Resource for Students and Educators Interested in Lipids.<\/b><\/span>
\nJournal of Chemical Education.2012 Jan 10; 89 (2): 291-292 PubMed<\/span><\/a><\/span><\/p>\n

Sud M, Fahy E, Cotter D, Dennis EA, Subramaniam S.<\/p>\n

PEG-albumin plasma expansion increases expression of MCP-1 evidencing increased circulatory wall shear stress: an experimental study.<\/b><\/span>
\nPLoS One. 2012 Jun 14; 7 (6): e39111 PubMed<\/span><\/a><\/span><\/p>\n

Hightower CM, Salazar V\u00e1zquez BY, Acharya SA, Subramaniam S, Intaglietta M.<\/p>\n

Regulated accumulation of desmosterol integrates macrophage lipid metabolism and inflammatory responses.<\/b><\/span>
\nCell. 2012 Sep 28; 151 (1): 138-52 PubMed<\/span><\/a><\/span><\/p>\n

Spann NJ, Garmire LX, McDonald JG, Myers DS, Milne SB, Shibata N, Reichart D, Fox JN, Shaked I, Heudobler D, Raetz CR, Wang EW, Kelly SL, Sullards MC, Murphy RC, Merrill AH Jr, Brown HA, Dennis EA, Li AC, Ley K, Tsimikas S, Fahy E, Subramaniam S, Quehenberger O, Russell DW, Glass CK.<\/p>\n

Stochastic operator-splitting method for reaction-diffusion systems.<\/b><\/span>
\nThe Journal of Chemical Physics. 2012 Nov 14; 137 (18): 184102 PubMed<\/span><\/a><\/span><\/p>\n

Choi T, Maurya MR, Tartakovsky DM, Subramaniam S.<\/p>\n

Template-based combinatorial enumeration of virtual compound libraries for lipids.<\/b><\/span>
\nJournal of Cheminformatics. 2012 Sep 25; 4 (1): 23 PubMed<\/span><\/a><\/span><\/p>\n

Sud M, Fahy E, Subramaniam S.<\/p>\n

Transcriptional abnormalities of hamstring muscle contractures in children with cerebral palsy.<\/b><\/span>
\nPLoS One. 2012 Aug 16; 7 (8): e40686 PubMed<\/span><\/a><\/span><\/p>\n

Smith LR, Chambers HG, Subramaniam S, Lieber RL.<\/p>\n

Whole-genome microRNA screening identifies let-7 and mir-18 as regulators of germ layer formation during early embryogenesis.<\/b><\/span>
\nGenes & Development. 2012 Dec 1; 26 (23): 2567\u20132579 <\/span> PubMed<\/span><\/a><\/span><\/p>\n

Colas AR, McKeithan WL, Cunningham TJ, Bushway PJ, Garmire LX, Duester G, Subramaniam S, Mercola M.<\/p>\n","protected":false},"excerpt":{"rendered":"

A complement-IL-4 regulatory circuit controls liver regeneration. The Journal of Immunology. 2012 Jan 15; 188 (2): 641-648\u00a0 PubMed DeAngelis RA, Markiewski MM, […]<\/p>\n","protected":false},"author":10,"featured_media":0,"parent":186,"menu_order":8,"comment_status":"closed","ping_status":"closed","template":"page-templates\/page_fullwidth.php","meta":{"footnotes":""},"class_list":["post-130","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/130","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/users\/10"}],"replies":[{"embeddable":true,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/comments?post=130"}],"version-history":[{"count":7,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/130\/revisions"}],"predecessor-version":[{"id":1345,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/130\/revisions\/1345"}],"up":[{"embeddable":true,"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/pages\/186"}],"wp:attachment":[{"href":"https:\/\/genome.ucsd.edu\/index.php\/wp-json\/wp\/v2\/media?parent=130"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}