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People

Principal Investigator

shankar@sdsc.edu

Shankar Subramaniam is Professor and Chair of Bioengineering and Director of the Bioinformatics Graduate Program at the University of California at San Diego. 

He also has adjunct Professorships at the Salk Institute for Biological Studies and the San Diego Supercomputer Center. He is also a Guest Professor at the Center for Molecular Biology and Neuroscience at the University of Oslo in Norway and Professor at the Center for Cardiovascular Bioinformatics and Modeling at Johns Hopkins University.

He has played a key role in raising national awareness for training and research in bioinformatics. Research in Subramaniam laboratory spans several areas of bioinformatics and systems biology.  In bioinformatics he is involved in developing novel strategies for identifying protein interaction networks, intracellular localization of proteins and identification of functional networks in cells.In systems biology he is involved in deciphering mammalian cellular networks from high throughput and phenotypic data and in developing strategies for modeling cellular signaling networks. He collaborates with biomedical scientists towards understanding diseases associated with insulin resistance and inflammation. His laboratory is interested in mapping the circuitry of the macrophage cells. He continues to be engaged in developing state-of-the-art infrastructure for bioinformatics.

Administration

Risa Shibata

rshibata@sdsc.edu

858-822-3228

Research Programmars/ Research Scientists
Eoin Fahy PhD fahye@ucsd.edu 858-534-5076
Robert Byrnes PhD rbyrnes@sdsc.edu 858-822-5424
Manish Sud manish@sdsc.edu 858-822-3697
Brian Saunders PhD saunders@sdsc.edu 858-822-3621
Raman Bhaskar PhD rbhasker@ucsd.edu  
Yihua Zhao PhD yihua@sdsc.edu 858-534-3399
Mano Maurya PhD mano@sdsc.edu 858-822-5403
Dawn Cotter dcotter@sdsc.edu  
Stephen Lyon slyon@sdsc.edu 858-534-5139
Postdoctoral Associates
Shakti Gupta PhD shakti@sdsc.edu  
Sean Li PhD seanli@sdsc.edu 858-534-5116
Pang Ko PhD pako@ucsd.edu 858-534-8396
Ashok Reddy PhD areddy@sdsc.edu 858-822-5449
Christopher Walsh PhD cwalsh@salk.edu  
Prasad V Burra PhD pburra@ucsd.edu  
Lan Garmire PhD lgarmire@sdsc.edu 858-534-8396
Graduate Student
Eugene Ke eke@ucsd.edu  
Stan Luban sluban@gmail.com  
Nitin Udpa nudpa@sdsc.edu  
Scott Bornheimer sbornhei@chem.ucsd.edu  
Chris Benner cbenner@ucsd.edu  
Vipul Bhargava vipulb@ucsd.edu  
Frederick Lo flo@ucsd.edu  
Gene Hsiao gene@sdsc.edu